The Biomedical Image Segmentation App

Publications using Biomedisa

The following publications used Biomedisa for image segmentation. Please get in touch with us if your publication is missing.

2021

Bemmann, M. et al. Movement analysis of primate molar teeth under load using synchrotron X-ray microtomography. J. Struct. Biol. 213, 107658 (2021).

2020

Richter, A. et al. Comparative analysis of worker head anatomy of Formica and Brachyponera (Hymenoptera: Formicidae). Arthropod Syst Phylo. 78, 133-170 (2020).

Gutiérrez, Y., David, O. & Scherber, C. Direct and indirect effects of plant diversity and phenoxy herbicide application on the development and reproduction of a polyphagous herbivore. Sci. Rep. 10, 7300 (2020).

Buser, T.J. et al. The natural historian’s guide to the CT galaxy: step-by-step instructions for preparing and analyzing computed tomographic (CT) data using cross-platform, open access software. Integr. Comp. Biol. obaa009 (2020).

2019

Balanta-Melo, J. et al. Masseter muscle atrophy impairs bone quality of the mandibular condyle but not the alveolar process early after induction. J. Oral Rehabil. 46, 233-241 (2019).

2018

Balanta-Melo, J., Bemmann, M., Toro-Ibacache, V., Kupczik, K. & Buvinic, S. Three-dimensional assessment of enamel and dentine in mouse molar teeth during masseter muscle hypofunction. Rev. Estomatol. 26, 30-37 (2018).

Mikó, I. et al. Revision of Trassedia (Hymenoptera: Ceraphronidae), an Evolutionary Relict With an Unusual Distribution. Insect Syst. Divers. 2, 1-29 (2018).

Weinhardt, W. et al. Quantitative morphometric analysis of adult teleost fish by X-ray computed tomography. Sci. Rep. 8, 16531 (2018).

van de Kamp, T. et al. Parasitoid biology preserved in mineralized fossils. Nat. Commun. 9, 3325 (2018).

Mikó, I. et al. A new megaspilid wasp from Eocene Baltic amber (Hymenoptera: Ceraphronoidea), with notes on two non-ceraphronoid families: Radiophronidae and Stigmaphronidae. PeerJ 6, e5174 (2018).

2017

Schmelzle, S. et al. The NOVA project: maximizing beam time efficiency through synergistic analyses of SRμCT data. In Proc. SPIE 103910, 103910P (2017).

Lösel, P. & Heuveline, V. A GPU Based Diffusion Method for Whole-Heart and Great Vessel Segmentation, in Reconstruction, Segmentation, and Analysis of Medical Images. RAMBO 2016, HVSMR 2016 (eds Zuluaga, M., Bhatia, K., Kainz, B., Moghari, M. & Pace, D.) 121-128 (Springer, Cham, 2017).

2016

Lösel, P. & Heuveline, V. Enhancing a diffusion algorithm for 4D image segmentation using local information. In Proc. SPIE 9784, 97842L (2016).